Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 KRT8P29-201ENST00000420409 1371 ntBASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 RAB43P1-201ENST00000561790 589 ntBASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 AC018629.1-201ENST00000623381 1736 ntBASIC13.25□□□□□ -0.29
THUMPD1Q9NXG2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AP002353.1-201ENST00000528257 1599 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 PTPRVP-205ENST00000641549 5067 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC021723.1-201ENST00000486306 515 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC008805.1-201ENST00000590892 364 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AL512343.1-201ENST00000605837 169 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 AC105233.6-201ENST00000642093 218 ntBASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
THUMPD1Q9NXG2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms