Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CUEDC1Q9NWM3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CUEDC1Q9NWM3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 BANF1P3-201ENST00000412556 261 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 NOC2LP1-201ENST00000450578 752 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AL353637.1-201ENST00000451571 732 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 GOLGA2P8-201ENST00000505201 779 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 MIR4754-201ENST00000582477 89 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 LINC01783-202ENST00000614408 828 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 BX284668.2-205ENST00000619677 828 ntBASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CUEDC1Q9NWM3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 AC072061.1-201ENST00000569710 2234 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 RCC2P1-201ENST00000452257 1476 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 OR2K2-202ENST00000374428 1038 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 CHCHD2P2-201ENST00000503744 321 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 AC005740.1-201ENST00000515639 522 ntBASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.63□□□□□ -0.23
CUEDC1Q9NWM3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms