Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AC005225.4-201ENST00000557330 545 ntBASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 AC008040.5-201ENST00000599781 1781 ntBASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
PHACTR1Q9C0D0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 CR383656.12-201ENST00000549567 513 ntBASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 LINC00638-201ENST00000555578 2518 ntBASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AL445209.1-201ENST00000607269 3491 ntBASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.27□□□□□ -0.13
PHACTR1Q9C0D0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AC004899.2-201ENST00000622993 3860 ntBASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AL031719.1-201ENST00000623365 2587 ntBASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 TUBB2BP1-201ENST00000404155 871 ntBASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 TUBB8P8-201ENST00000458717 1058 ntBASIC14.26□□□□□ -0.13
PHACTR1Q9C0D0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms