Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 ACTBP11-201ENST00000436287 1126 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 HIST2H2BB-201ENST00000449108 381 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AL583810.1-201ENST00000553344 1045 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AC124068.2-201ENST00000569473 1109 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AC090386.2-201ENST00000623010 1039 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AL031595.1-201ENST00000623969 4709 ntBASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AMBRA1Q9C0C7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AC073862.5-201ENST00000624129 2027 ntBASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 CNN2P10-201ENST00000443067 918 ntBASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AC027369.3-201ENST00000530465 3707 ntBASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AMBRA1Q9C0C7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AMBRA1Q9C0C7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms