Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB40CQ96S21 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB40CQ96S21 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.43□□□□□ -0.58
RAB40CQ96S21 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SHMT1P1-201ENST00000419974 1312 ntBASIC11.43□□□□□ -0.58
RAB40CQ96S21 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 CD8B2-202ENST00000417670 633 ntBASIC11.43□□□□□ -0.58
RAB40CQ96S21 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 API5-211ENST00000534695 560 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RAB40CQ96S21 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.43□□□□□ -0.58
RAB40CQ96S21 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.42□□□□□ -0.58
RAB40CQ96S21 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RAB40CQ96S21 ST13P19-201ENST00000442505 1124 ntBASIC11.42□□□□□ -0.58
RAB40CQ96S21 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms