Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 TCAF1P1-201ENST00000414990 2232 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AL627422.1-201ENST00000434104 580 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC098934.1-203ENST00000442868 1262 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 IGHV3-37-201ENST00000518544 340 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 RPL17P45-201ENST00000586289 509 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SHROOM3Q8TF72 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PYY2-201ENST00000315776 282 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC087045.2-201ENST00000606279 1003 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PDXDC2P-206ENST00000534700 1315 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PES1P2-201ENST00000449745 1735 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC019294.4-201ENST00000561777 2905 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 MIR2392-201ENST00000584881 84 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 AC005618.3-201ENST00000624928 458 ntBASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.22□□□□□ -0.13
SHROOM3Q8TF72 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SHROOM3Q8TF72 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHROOM3Q8TF72 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHROOM3Q8TF72 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHROOM3Q8TF72 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms