Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 ASS1P1-201ENST00000402854 1237 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 AP001331.1-201ENST00000413008 1015 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 AL121994.1-201ENST00000413189 402 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 ACTBP9-201ENST00000587663 1099 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 AL512324.3-201ENST00000619383 882 ntBASIC16.6■□□□□ 0.25
SNED1Q8TER0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNED1Q8TER0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.6■□□□□ 0.25
SNED1Q8TER0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 MST1P2-201ENST00000457982 2291 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 AC090643.2-201ENST00000623442 2029 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 OR7E12P-201ENST00000344740 973 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 RBMX2P5-201ENST00000424312 969 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 RN7SL162P-201ENST00000579233 292 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 AC139100.2-201ENST00000616901 662 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 AL590556.2-202ENST00000636906 844 ntBASIC16.59■□□□□ 0.25
SNED1Q8TER0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.59■□□□□ 0.25
SNED1Q8TER0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNED1Q8TER0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SNED1Q8TER0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SNED1Q8TER0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SNED1Q8TER0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SNED1Q8TER0 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 RPL35P1-201ENST00000450819 370 ntBASIC16.58■□□□□ 0.24
SNED1Q8TER0 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 AC211476.2-201ENST00000608799 708 ntBASIC16.58■□□□□ 0.24
SNED1Q8TER0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNED1Q8TER0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 TCAM1P-207ENST00000485295 1537 ntBASIC16.58■□□□□ 0.24
SNED1Q8TER0 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 AP000437.1-201ENST00000624057 2085 ntBASIC16.58■□□□□ 0.24
SNED1Q8TER0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.58■□□□□ 0.24
SNED1Q8TER0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNED1Q8TER0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms