Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 RPSAP15-201ENST00000448168 861 ntBASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 RN7SL67P-201ENST00000492147 296 ntBASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 CICP8-201ENST00000455800 2813 ntBASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AC027612.1-201ENST00000445234 2395 ntBASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMARCC2Q8TAQ2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMARCC2Q8TAQ2 AC092053.3-201ENST00000641308 4975 ntBASIC16.39■□□□□ 0.22
SMARCC2Q8TAQ2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 Z98885.3-201ENST00000624882 1757 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 KRT17P5-201ENST00000332088 839 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 RPL8P2-201ENST00000430538 502 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CEP164P1-201ENST00000455142 418 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 AC005740.1-201ENST00000515639 522 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 KRT8P1-201ENST00000557533 1207 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 LINC00638-201ENST00000555578 2518 ntBASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMARCC2Q8TAQ2 CAP2P1-201ENST00000557743 1390 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms