Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ASS1P1-201ENST00000402854 1237 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SNRPCP15-201ENST00000424055 192 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AC026412.1-206ENST00000502273 206 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AC004466.2-201ENST00000614749 516 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 AC233280.19-201ENST00000633223 136 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 CICP16-201ENST00000502609 2813 ntBASIC15.12■□□□□ 0.01
KLHDC9Q8NEP7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 DNM1P46-202ENST00000415963 882 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC092865.2-201ENST00000439409 971 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC010900.1-201ENST00000449849 1296 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 PIGCP1-201ENST00000527583 895 ntBASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
KLHDC9Q8NEP7 AC133555.4-201ENST00000569081 152 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms