Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ATG4DQ86TL0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 LINC00638-201ENST00000555578 2518 ntBASIC12.71□□□□□ -0.37
ATG4DQ86TL0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AL355102.3-201ENST00000554299 1678 ntBASIC12.71□□□□□ -0.37
ATG4DQ86TL0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC016629.1-201ENST00000596579 586 ntBASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 AC244517.3-201ENST00000616254 1235 ntBASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.71□□□□□ -0.37
ATG4DQ86TL0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ATG4DQ86TL0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 BANF1P3-201ENST00000412556 261 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC073869.2-201ENST00000417338 1026 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AL133466.1-201ENST00000447582 150 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 RN7SL720P-201ENST00000488178 304 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC134698.3-201ENST00000523880 214 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AL133467.4-201ENST00000602953 725 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 AC106872.11-201ENST00000605838 421 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 MIR6769A-201ENST00000617340 73 ntBASIC12.7□□□□□ -0.38
ATG4DQ86TL0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ATG4DQ86TL0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms