Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 MIR766-201ENST00000390223 111 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 RPL3P9-201ENST00000463217 1183 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 CYP4F10P-201ENST00000589560 752 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC079331.1-201ENST00000623200 1200 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC022966.2-201ENST00000587434 367 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 AL078624.1-201ENST00000604004 547 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AC093462.1-201ENST00000621167 1683 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 CLK2P1-201ENST00000416636 1294 ntBASIC11.19□□□□□ -0.62
VPS13CQ709C8 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC11.19□□□□□ -0.62
VPS13CQ709C8 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VPS13CQ709C8 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 KRT19P4-201ENST00000443208 943 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AL356740.1-201ENST00000602192 1297 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 GBAP1-208ENST00000566701 1546 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC004623.1-201ENST00000624592 2127 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 RN7SL479P-201ENST00000472003 300 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC104212.2-201ENST00000478813 628 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC091736.1-201ENST00000609370 305 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VPS13CQ709C8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
VPS13CQ709C8 AC106872.9-201ENST00000512437 1393 ntBASIC11.18□□□□□ -0.62
VPS13CQ709C8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms