Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFWD3Q6PCD5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 MIR645-201ENST00000385283 94 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 HINT2P1-201ENST00000419438 481 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 FTH1P22-201ENST00000456305 520 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AL021707.6-201ENST00000609212 491 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AC103691.2-201ENST00000618824 433 ntBASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.66□□□□□ -0.06
RFWD3Q6PCD5 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AP000356.3-201ENST00000382243 753 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 FTLP1-201ENST00000449155 526 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AC005740.1-201ENST00000515639 522 ntBASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFWD3Q6PCD5 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms