Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 MIR557-201ENST00000385239 98 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 AL583805.1-201ENST00000391389 531 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 OR8T1P-201ENST00000421347 918 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 GOLGA2P8-201ENST00000505201 779 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 MIR3907-201ENST00000579424 151 ntBASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TTC39BQ5VTQ0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AC068760.1-201ENST00000493579 1953 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 OR2K2-202ENST00000374428 1038 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AL592076.1-201ENST00000424448 303 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AC015967.2-201ENST00000624092 234 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AC006435.4-201ENST00000625037 234 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 AL356737.1-201ENST00000634391 234 ntBASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TTC39BQ5VTQ0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TTC39BQ5VTQ0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms