Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AC019109.1-201ENST00000401725 1874 ntBASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CTC1Q2NKJ3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 NHP2P1-201ENST00000335274 462 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AC006987.1-201ENST00000413610 527 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AC023141.7-201ENST00000430646 407 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ASS1P2-201ENST00000439895 1223 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 BCRP4-201ENST00000506079 804 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 VENTXP3-201ENST00000546480 773 ntBASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.96□□□□□ -0.01
CTC1Q2NKJ3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CTC1Q2NKJ3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.96□□□□□ -0.02
CTC1Q2NKJ3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CTC1Q2NKJ3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.96□□□□□ -0.02
CTC1Q2NKJ3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CTC1Q2NKJ3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 OR7E115P-201ENST00000382617 1024 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 AC004522.1-201ENST00000419978 654 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 PSAT1P2-201ENST00000426107 972 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 IGHEP1-201ENST00000521393 651 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 KNOP1P1-201ENST00000542108 989 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 AL365209.1-201ENST00000624418 6473 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 AC067930.6-201ENST00000623257 4947 ntBASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CTC1Q2NKJ3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms