Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CAV3P56539 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.6□□□□□ -0.39
CAV3P56539 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.6□□□□□ -0.39
CAV3P56539 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 AC108024.1-201ENST00000626286 1721 ntBASIC12.59□□□□□ -0.39
CAV3P56539 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 KRT8P28-201ENST00000433288 1390 ntBASIC12.59□□□□□ -0.39
CAV3P56539 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CAV3P56539 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.59□□□□□ -0.39
CAV3P56539 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 AL035252.4-201ENST00000624174 288 ntBASIC12.59□□□□□ -0.39
CAV3P56539 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 MSTO2P-201ENST00000314835 1709 ntBASIC12.59□□□□□ -0.39
CAV3P56539 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CAV3P56539 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CAV3P56539 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CAV3P56539 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CAV3P56539 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.58□□□□□ -0.39
CAV3P56539 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CAV3P56539 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CAV3P56539 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CAV3P56539 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.58□□□□□ -0.39
CAV3P56539 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
CAV3P56539 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.58□□□□□ -0.4
CAV3P56539 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CAV3P56539 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CAV3P56539 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.58□□□□□ -0.4
CAV3P56539 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.58□□□□□ -0.4
CAV3P56539 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.58□□□□□ -0.4
CAV3P56539 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CAV3P56539 ARSEP1-201ENST00000420443 635 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms