Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RN7SKP71-201ENST00000364558 318 ntBASIC15.05■□□□□ -0
HTTP42858 7SK.1-201ENST00000365328 331 ntBASIC15.05■□□□□ -0
HTTP42858 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HTTP42858 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC15.05■□□□□ -0
HTTP42858 EEF1GP1-201ENST00000457231 1299 ntBASIC15.05■□□□□ -0
HTTP42858 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC15.05■□□□□ -0
HTTP42858 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC15.05■□□□□ -0
HTTP42858 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
HTTP42858 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
HTTP42858 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.05■□□□□ -0
HTTP42858 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HTTP42858 AC073488.1-201ENST00000416620 1600 ntBASIC15.05■□□□□ -0
HTTP42858 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
HTTP42858 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC15.05■□□□□ -0
HTTP42858 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC15.05■□□□□ -0
HTTP42858 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
HTTP42858 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC15.05■□□□□ -0
HTTP42858 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.05■□□□□ -0
HTTP42858 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
HTTP42858 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HTTP42858 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HTTP42858 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HTTP42858 AP000346.2-202ENST00000425948 383 ntBASIC15.04■□□□□ -0
HTTP42858 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC15.04■□□□□ -0
HTTP42858 AC104117.1-201ENST00000517817 900 ntBASIC15.04■□□□□ -0
HTTP42858 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC15.04■□□□□ -0
HTTP42858 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC15.04■□□□□ -0
HTTP42858 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC15.04■□□□□ -0
HTTP42858 AC013472.3-201ENST00000607407 659 ntBASIC15.04■□□□□ -0
HTTP42858 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.04■□□□□ -0
HTTP42858 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.04■□□□□ -0
HTTP42858 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC15.04■□□□□ -0
HTTP42858 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.04■□□□□ -0
HTTP42858 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC15.04■□□□□ -0
HTTP42858 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC15.04■□□□□ -0
HTTP42858 NAA38-204ENST00000575208 529 ntTSL 3 BASIC15.04■□□□□ -0
HTTP42858 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HTTP42858 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HTTP42858 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.04■□□□□ -0
HTTP42858 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
HTTP42858 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC15.03■□□□□ -0
HTTP42858 AC145285.1-201ENST00000469929 694 ntBASIC15.03■□□□□ -0
HTTP42858 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC15.03■□□□□ -0
HTTP42858 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC15.03■□□□□ -0
HTTP42858 MIR3940-201ENST00000579148 102 ntBASIC15.03■□□□□ -0
HTTP42858 WSB1-213ENST00000583193 552 ntTSL 4 BASIC15.03■□□□□ -0
HTTP42858 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 SARS2-211ENST00000598831 665 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC15.03■□□□□ -0
HTTP42858 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC15.03■□□□□ -0
HTTP42858 AC011239.2-201ENST00000624820 1489 ntBASIC15.03■□□□□ -0
HTTP42858 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HTTP42858 AC007690.1-201ENST00000451924 468 ntBASIC15.03■□□□□ -0
HTTP42858 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HTTP42858 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HTTP42858 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 AF013593.1-201ENST00000458074 1487 ntBASIC15.03■□□□□ -0
HTTP42858 ZSCAN5DP-201ENST00000600684 1488 ntBASIC15.03■□□□□ -0
HTTP42858 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC15.03■□□□□ -0
HTTP42858 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HTTP42858 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 MTND6P4-201ENST00000506002 522 ntBASIC15.03■□□□□ -0
HTTP42858 ST3GAL1P1-201ENST00000513810 1014 ntBASIC15.03■□□□□ -0
HTTP42858 AC063924.1-201ENST00000546680 673 ntBASIC15.03■□□□□ -0
HTTP42858 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 AC017100.1-201ENST00000565978 1169 ntBASIC15.03■□□□□ -0
HTTP42858 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC15.03■□□□□ -0
HTTP42858 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.03■□□□□ -0
HTTP42858 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HTTP42858 NBEAP3-201ENST00000420638 1493 ntBASIC15.02■□□□□ -0
HTTP42858 AC126177.1-201ENST00000547829 2218 ntBASIC15.02■□□□□ -0
HTTP42858 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms