Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
APOBEC1P41238 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
APOBEC1P41238 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 AP000358.1-201ENST00000456260 156 ntBASIC12.68□□□□□ -0.38
APOBEC1P41238 COQ10BP2-201ENST00000513804 724 ntBASIC12.68□□□□□ -0.38
APOBEC1P41238 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 AC132825.4-202ENST00000578792 434 ntBASIC12.68□□□□□ -0.38
APOBEC1P41238 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.68□□□□□ -0.38
APOBEC1P41238 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
APOBEC1P41238 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 TBC1D27-202ENST00000424239 1573 ntBASIC12.68□□□□□ -0.38
APOBEC1P41238 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBEC1P41238 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.68□□□□□ -0.38
APOBEC1P41238 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBEC1P41238 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 CICP17-201ENST00000418553 2377 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.67□□□□□ -0.38
APOBEC1P41238 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.67□□□□□ -0.38
APOBEC1P41238 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC020917.4-201ENST00000623994 1999 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 AF013593.1-201ENST00000458074 1487 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 AL583805.1-201ENST00000391389 531 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 AL662890.1-201ENST00000396818 632 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC098934.1-203ENST00000442868 1262 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.67□□□□□ -0.38
APOBEC1P41238 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 RPL18AP8-201ENST00000486071 528 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 RN7SL67P-201ENST00000492147 296 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC145285.5-201ENST00000562217 361 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
APOBEC1P41238 AC007326.1-201ENST00000604539 458 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.67□□□□□ -0.38
APOBEC1P41238 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOBEC1P41238 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 AL358781.1-202ENST00000321081 1360 ntBASIC12.67□□□□□ -0.38
APOBEC1P41238 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOBEC1P41238 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.67□□□□□ -0.38
APOBEC1P41238 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms