Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP6P35125 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.39■□□□□ 0.53
USP6P35125 CROT-203ENST00000419147 2959 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6P35125 AC008494.1-201ENST00000497612 796 ntBASIC18.39■□□□□ 0.53
USP6P35125 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
USP6P35125 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC18.39■□□□□ 0.53
USP6P35125 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6P35125 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
USP6P35125 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
USP6P35125 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6P35125 MKRN7P-201ENST00000433469 1371 ntBASIC18.39■□□□□ 0.53
USP6P35125 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6P35125 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 LINC02228-204ENST00000642115 2962 ntBASIC18.38■□□□□ 0.53
USP6P35125 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 AL157832.2-205ENST00000597245 1649 ntBASIC18.38■□□□□ 0.53
USP6P35125 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6P35125 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 RBM14-205ENST00000443702 732 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6P35125 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6P35125 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6P35125 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6P35125 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 CA6-205ENST00000480186 1493 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6P35125 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6P35125 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
USP6P35125 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 AC008038.1-201ENST00000634247 1314 ntBASIC18.37■□□□□ 0.53
USP6P35125 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 GYG1-209ENST00000483267 801 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC18.37■□□□□ 0.53
USP6P35125 AC011431.1-201ENST00000512971 230 ntBASIC18.37■□□□□ 0.53
USP6P35125 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.37■□□□□ 0.53
USP6P35125 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
USP6P35125 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
USP6P35125 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
USP6P35125 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP6P35125 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
USP6P35125 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
USP6P35125 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6P35125 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms