Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA3P32297 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA3P32297 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNA3P32297 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CHRNA3P32297 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 AC004623.1-201ENST00000624592 2127 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 DLX4-206ENST00000611342 1662 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHRNA3P32297 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 AC007952.5-201ENST00000572818 1486 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 HMGA1P1-201ENST00000415560 1062 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 AL645933.1-201ENST00000440087 609 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 SCARNA21-201ENST00000517026 139 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNA3P32297 AC026740.1-201ENST00000607068 791 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHRNA3P32297 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 POM121L14P-201ENST00000406100 1558 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 AC125807.2-201ENST00000513358 3514 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA3P32297 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA3P32297 SALL4P6-201ENST00000429385 1691 ntBASIC14.84□□□□□ -0.03
CHRNA3P32297 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA3P32297 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.83□□□□□ -0.03
CHRNA3P32297 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CHRNA3P32297 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.83□□□□□ -0.03
CHRNA3P32297 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA3P32297 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CHRNA3P32297 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.83□□□□□ -0.03
CHRNA3P32297 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.83□□□□□ -0.03
CHRNA3P32297 AC005014.1-201ENST00000432006 2976 ntBASIC14.83□□□□□ -0.03
CHRNA3P32297 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA3P32297 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 MIR769-201ENST00000390225 118 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 CYP46A4P-201ENST00000414953 267 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 SLC25A24P2-201ENST00000415059 510 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 SPTLC1P5-201ENST00000450718 252 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 IGHJ2P-201ENST00000454480 60 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.83□□□□□ -0.04
CHRNA3P32297 AC100757.4-201ENST00000626934 759 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 CCT8L1P-201ENST00000465400 1674 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA3P32297 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA3P32297 PCDHB18P-202ENST00000526308 3197 ntBASIC14.83□□□□□ -0.04
CHRNA3P32297 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA3P32297 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA3P32297 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA3P32297 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA3P32297 C8orf49-201ENST00000525043 1968 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms