Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.96□□□□□ -0.02
FAM228BP0C875 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
FAM228BP0C875 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
FAM228BP0C875 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 PCDHA5-203ENST00000614258 4248 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
FAM228BP0C875 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.95□□□□□ -0.02
FAM228BP0C875 OR8T1P-201ENST00000421347 918 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 FAM21FP-201ENST00000426241 1131 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 RPL13AP20-201ENST00000459725 609 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.95□□□□□ -0.02
FAM228BP0C875 RNA5SP412-201ENST00000516234 123 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.95□□□□□ -0.02
FAM228BP0C875 RN7SL560P-201ENST00000577943 264 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 AC133552.6-201ENST00000613406 534 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 AL139424.3-202ENST00000641619 917 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.95□□□□□ -0.02
FAM228BP0C875 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
FAM228BP0C875 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 AC020763.3-201ENST00000625095 2904 ntBASIC14.95□□□□□ -0.02
FAM228BP0C875 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FAM228BP0C875 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FAM228BP0C875 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.94□□□□□ -0.02
FAM228BP0C875 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC018735.1-201ENST00000437208 1502 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 DPM3-202ENST00000368399 517 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.94□□□□□ -0.02
FAM228BP0C875 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 BTBD6P1-201ENST00000412176 1267 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 KRT223P-202ENST00000449164 1292 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC116345.2-201ENST00000512837 523 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 AC005740.1-201ENST00000515639 522 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.94□□□□□ -0.02
FAM228BP0C875 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.94□□□□□ -0.02
FAM228BP0C875 AL132994.2-201ENST00000603120 687 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 AC007663.3-201ENST00000609632 465 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC015967.2-201ENST00000624092 234 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 AC006435.4-201ENST00000625037 234 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 AL356737.1-201ENST00000634391 234 ntBASIC14.94□□□□□ -0.02
FAM228BP0C875 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.94□□□□□ -0.02
FAM228BP0C875 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.94□□□□□ -0.02
FAM228BP0C875 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FAM228BP0C875 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
FAM228BP0C875 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FAM228BP0C875 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms