Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.14□□□□□ -0.15
RETP07949 IGHV1-12-201ENST00000518307 205 ntBASIC14.14□□□□□ -0.15
RETP07949 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.14□□□□□ -0.15
RETP07949 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
RETP07949 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 KNOP1P1-201ENST00000542108 989 ntBASIC14.14□□□□□ -0.15
RETP07949 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.14□□□□□ -0.15
RETP07949 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.14□□□□□ -0.15
RETP07949 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RETP07949 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.14□□□□□ -0.15
RETP07949 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.14□□□□□ -0.15
RETP07949 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.14□□□□□ -0.15
RETP07949 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RETP07949 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RETP07949 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.14□□□□□ -0.15
RETP07949 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RETP07949 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 KRT8P24-201ENST00000560290 1559 ntBASIC14.13□□□□□ -0.15
RETP07949 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RETP07949 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
RETP07949 AC089987.1-201ENST00000551654 2209 ntBASIC14.13□□□□□ -0.15
RETP07949 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.13□□□□□ -0.15
RETP07949 AL591122.2-201ENST00000624125 1853 ntBASIC14.13□□□□□ -0.15
RETP07949 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 RN7SL288P-201ENST00000490496 291 ntBASIC14.13□□□□□ -0.15
RETP07949 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.13□□□□□ -0.15
RETP07949 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.13□□□□□ -0.15
RETP07949 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 KRT8P2-201ENST00000556193 944 ntBASIC14.13□□□□□ -0.15
RETP07949 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.13□□□□□ -0.15
RETP07949 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.13□□□□□ -0.15
RETP07949 AL359091.4-201ENST00000610052 409 ntBASIC14.13□□□□□ -0.15
RETP07949 AC011462.4-201ENST00000616866 449 ntBASIC14.13□□□□□ -0.15
RETP07949 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.13□□□□□ -0.15
RETP07949 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RETP07949 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RETP07949 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.13□□□□□ -0.15
RETP07949 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RETP07949 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RETP07949 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RETP07949 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RETP07949 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.12□□□□□ -0.15
RETP07949 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
RETP07949 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RETP07949 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RETP07949 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.12□□□□□ -0.15
RETP07949 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms