Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.52□□□□□ -0.41
APOC1P02654 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC1P02654 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC1P02654 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC1P02654 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.52□□□□□ -0.41
APOC1P02654 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.52□□□□□ -0.41
APOC1P02654 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 AL512343.1-201ENST00000605837 169 ntBASIC12.52□□□□□ -0.41
APOC1P02654 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 AP000346.4-201ENST00000614827 381 ntBASIC12.52□□□□□ -0.41
APOC1P02654 AL023803.2-201ENST00000620080 638 ntBASIC12.52□□□□□ -0.41
APOC1P02654 AL162426.1-201ENST00000624141 743 ntBASIC12.52□□□□□ -0.41
APOC1P02654 Z98259.2-201ENST00000641583 609 ntBASIC12.52□□□□□ -0.41
APOC1P02654 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
APOC1P02654 AC061965.1-201ENST00000560524 1465 ntBASIC12.52□□□□□ -0.41
APOC1P02654 AC004899.2-201ENST00000622993 3860 ntBASIC12.52□□□□□ -0.41
APOC1P02654 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOC1P02654 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
APOC1P02654 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC1P02654 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
APOC1P02654 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC1P02654 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC1P02654 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.51□□□□□ -0.41
APOC1P02654 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOC1P02654 PGAM1P5-201ENST00000548011 764 ntBASIC12.51□□□□□ -0.41
APOC1P02654 AP005482.1-201ENST00000563722 1273 ntBASIC12.51□□□□□ -0.41
APOC1P02654 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC1P02654 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOC1P02654 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOC1P02654 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
APOC1P02654 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC1P02654 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC1P02654 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC1P02654 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms