Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.58□□□□□ -0.72
LTAP01374 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LTAP01374 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LTAP01374 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.58□□□□□ -0.72
LTAP01374 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LTAP01374 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.58□□□□□ -0.72
LTAP01374 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 AP000347.1-202ENST00000435868 847 ntBASIC10.58□□□□□ -0.72
LTAP01374 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 SPTLC1P1-201ENST00000447199 261 ntBASIC10.58□□□□□ -0.72
LTAP01374 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 RNA5SP486-201ENST00000515961 83 ntBASIC10.58□□□□□ -0.72
LTAP01374 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.58□□□□□ -0.72
LTAP01374 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.58□□□□□ -0.72
LTAP01374 AC025279.2-201ENST00000569730 653 ntBASIC10.58□□□□□ -0.72
LTAP01374 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 AC132192.2-201ENST00000596206 1147 ntBASIC10.58□□□□□ -0.72
LTAP01374 AC073413.1-201ENST00000603927 732 ntBASIC10.58□□□□□ -0.72
LTAP01374 WFDC1-204ENST00000613603 549 ntBASIC10.58□□□□□ -0.72
LTAP01374 AL136301.1-201ENST00000615830 422 ntBASIC10.58□□□□□ -0.72
LTAP01374 AL161773.1-201ENST00000624845 863 ntBASIC10.58□□□□□ -0.72
LTAP01374 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC10.58□□□□□ -0.72
LTAP01374 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC10.58□□□□□ -0.72
LTAP01374 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 AC012531.1-201ENST00000562848 2680 ntBASIC10.58□□□□□ -0.72
LTAP01374 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.58□□□□□ -0.72
LTAP01374 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LTAP01374 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.58□□□□□ -0.72
LTAP01374 STX3-207ENST00000633708 3111 ntTSL 5 BASIC10.58□□□□□ -0.72
LTAP01374 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LTAP01374 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LTAP01374 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 TRIM80P-201ENST00000455685 2848 ntBASIC10.57□□□□□ -0.72
LTAP01374 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 RPL13AP3-202ENST00000494676 1473 ntBASIC10.57□□□□□ -0.72
LTAP01374 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 DNM1P41-201ENST00000623634 3350 ntBASIC10.57□□□□□ -0.72
LTAP01374 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 TUBB2BP1-201ENST00000404155 871 ntBASIC10.57□□□□□ -0.72
LTAP01374 HNRNPA1P40-201ENST00000426371 1278 ntBASIC10.57□□□□□ -0.72
LTAP01374 ACTG1P3-201ENST00000431775 1114 ntBASIC10.57□□□□□ -0.72
LTAP01374 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
LTAP01374 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC10.57□□□□□ -0.72
LTAP01374 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC10.57□□□□□ -0.72
LTAP01374 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
LTAP01374 AL132655.2-201ENST00000596276 594 ntBASIC10.57□□□□□ -0.72
LTAP01374 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 CHCHD2P3-201ENST00000603038 451 ntBASIC10.57□□□□□ -0.72
LTAP01374 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.57□□□□□ -0.72
LTAP01374 MIR6720-201ENST00000611664 98 ntBASIC10.57□□□□□ -0.72
LTAP01374 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.57□□□□□ -0.72
LTAP01374 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LTAP01374 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.57□□□□□ -0.72
LTAP01374 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.57□□□□□ -0.72
LTAP01374 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms