Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-2O95096 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 CICP17-201ENST00000418553 2377 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
NKX2-2O95096 MSNP1-201ENST00000511640 1732 ntBASIC12.91□□□□□ -0.34
NKX2-2O95096 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-2O95096 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 AC005014.1-201ENST00000432006 2976 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 AL355102.3-201ENST00000554299 1678 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NKX2-2O95096 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 AL807761.2-201ENST00000422849 729 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.9□□□□□ -0.34
NKX2-2O95096 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.9□□□□□ -0.34
NKX2-2O95096 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 AC145285.5-201ENST00000562217 361 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.9□□□□□ -0.34
NKX2-2O95096 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
NKX2-2O95096 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.9□□□□□ -0.34
NKX2-2O95096 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 AC138627.1-207ENST00000641560 1006 ntBASIC12.9□□□□□ -0.34
NKX2-2O95096 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
NKX2-2O95096 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NKX2-2O95096 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-2O95096 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-2O95096 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-2O95096 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
NKX2-2O95096 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.9□□□□□ -0.35
NKX2-2O95096 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-2O95096 AC245140.2-201ENST00000624054 1939 ntBASIC12.9□□□□□ -0.35
NKX2-2O95096 AL445250.1-201ENST00000641671 2259 ntBASIC12.9□□□□□ -0.35
NKX2-2O95096 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-2O95096 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-2O95096 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
NKX2-2O95096 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-2O95096 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
NKX2-2O95096 TEKT4P2-202ENST00000559466 1312 ntBASIC12.89□□□□□ -0.35
NKX2-2O95096 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
NKX2-2O95096 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NKX2-2O95096 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-2O95096 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NKX2-2O95096 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms