Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC6□□□□□ -1.45
USH2AO75445 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USH2AO75445 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC6□□□□□ -1.45
USH2AO75445 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC6□□□□□ -1.45
USH2AO75445 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
USH2AO75445 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC6□□□□□ -1.45
USH2AO75445 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USH2AO75445 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AC144831.1-201ENST00000573312 2656 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AC245297.1-201ENST00000313342 933 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 RN7SL733P-201ENST00000582253 329 ntBASIC5.99□□□□□ -1.45
USH2AO75445 CTBP2P7-201ENST00000593270 1244 ntBASIC5.99□□□□□ -1.45
USH2AO75445 RN7SL248P-201ENST00000615117 329 ntBASIC5.99□□□□□ -1.45
USH2AO75445 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC5.99□□□□□ -1.45
USH2AO75445 RN7SL453P-201ENST00000620275 329 ntBASIC5.99□□□□□ -1.45
USH2AO75445 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 AC111170.3-201ENST00000624282 2464 ntBASIC5.99□□□□□ -1.45
USH2AO75445 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 EML1-203ENST00000334192 4064 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 PFN1P10-201ENST00000455962 327 ntBASIC5.99□□□□□ -1.45
USH2AO75445 RN7SL483P-201ENST00000478417 285 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AC116553.1-201ENST00000561752 397 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AC011239.2-201ENST00000624820 1489 ntBASIC5.99□□□□□ -1.45
USH2AO75445 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USH2AO75445 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 ARF1P2-201ENST00000392493 538 ntBASIC5.99□□□□□ -1.45
USH2AO75445 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AL132656.1-201ENST00000452173 490 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 MTHFD2P7-201ENST00000483867 983 ntBASIC5.99□□□□□ -1.45
USH2AO75445 AK2-208ENST00000487289 920 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC5.99□□□□□ -1.45
USH2AO75445 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC5.99□□□□□ -1.45
USH2AO75445 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 AL117379.1-201ENST00000619319 677 ntBASIC5.99□□□□□ -1.45
USH2AO75445 TTC38-207ENST00000629918 162 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 AC099795.2-201ENST00000639582 440 ntBASIC5.99□□□□□ -1.45
USH2AO75445 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC5.99□□□□□ -1.45
USH2AO75445 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
USH2AO75445 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms