Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.97□□□□□ -0.01
O00370 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.97□□□□□ -0.01
O00370 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
O00370 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
O00370 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
O00370 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.96□□□□□ -0.01
O00370 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
O00370 MIR557-201ENST00000385239 98 ntBASIC14.96□□□□□ -0.01
O00370 AL662890.1-201ENST00000396818 632 ntBASIC14.96□□□□□ -0.01
O00370 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.96□□□□□ -0.01
O00370 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
O00370 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.96□□□□□ -0.01
O00370 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.96□□□□□ -0.01
O00370 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 AL133466.1-201ENST00000447582 150 ntBASIC14.96□□□□□ -0.01
O00370 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.96□□□□□ -0.01
O00370 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
O00370 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
O00370 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.96□□□□□ -0.01
O00370 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 KRT18P8-201ENST00000581937 1246 ntBASIC14.96□□□□□ -0.01
O00370 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.96□□□□□ -0.01
O00370 AC097724.1-201ENST00000609581 426 ntBASIC14.96□□□□□ -0.01
O00370 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.96□□□□□ -0.01
O00370 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
O00370 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.96□□□□□ -0.02
O00370 FAM90A2P-201ENST00000511144 1395 ntBASIC14.96□□□□□ -0.02
O00370 FAM90A25P-201ENST00000528404 1395 ntBASIC14.96□□□□□ -0.02
O00370 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.95□□□□□ -0.02
O00370 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
O00370 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
O00370 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.95□□□□□ -0.02
O00370 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 DUTP3-201ENST00000450025 415 ntBASIC14.95□□□□□ -0.02
O00370 RN7SL67P-201ENST00000492147 296 ntBASIC14.95□□□□□ -0.02
O00370 AC245884.6-201ENST00000515672 1067 ntBASIC14.95□□□□□ -0.02
O00370 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.95□□□□□ -0.02
O00370 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.95□□□□□ -0.02
O00370 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.95□□□□□ -0.02
O00370 MIR3677-201ENST00000578964 60 ntBASIC14.95□□□□□ -0.02
O00370 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.95□□□□□ -0.02
O00370 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.95□□□□□ -0.02
O00370 AL133467.4-201ENST00000602953 725 ntBASIC14.95□□□□□ -0.02
O00370 CR392039.2-201ENST00000623182 509 ntBASIC14.95□□□□□ -0.02
O00370 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
O00370 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms