Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 AL161932.2-201ENST00000435436 679 ntBASIC15.32■□□□□ 0.04
CCDC66A2RUB6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 TDH-203ENST00000531764 1110 ntBASIC15.32■□□□□ 0.04
CCDC66A2RUB6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 TP53TG3HP-202ENST00000569755 579 ntBASIC15.32■□□□□ 0.04
CCDC66A2RUB6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 AC135782.3-201ENST00000562782 2105 ntBASIC15.32■□□□□ 0.04
CCDC66A2RUB6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC66A2RUB6 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 TP73-203ENST00000357733 4899 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AC104506.1-201ENST00000609247 429 ntBASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC66A2RUB6 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC66A2RUB6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms