Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC013355.1-201ENST00000562625 723 ntBASIC14.3□□□□□ -0.12
CCDC78A2IDD5 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 AL008638.5-201ENST00000623814 1298 ntBASIC14.3□□□□□ -0.12
CCDC78A2IDD5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 LINC00567-201ENST00000569854 3409 ntBASIC14.3□□□□□ -0.12
CCDC78A2IDD5 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCDC78A2IDD5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 COL6A4P2-202ENST00000504443 2753 ntBASIC14.29□□□□□ -0.12
CCDC78A2IDD5 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 DGCR9-201ENST00000609630 2415 ntBASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 RCC2P8-201ENST00000502779 1035 ntBASIC14.29□□□□□ -0.12
CCDC78A2IDD5 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 AC009779.1-201ENST00000551138 283 ntBASIC14.29□□□□□ -0.12
CCDC78A2IDD5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 AC068760.1-201ENST00000493579 1953 ntBASIC14.29□□□□□ -0.12
CCDC78A2IDD5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC78A2IDD5 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 BRD7P5-201ENST00000299197 1822 ntBASIC14.28□□□□□ -0.12
CCDC78A2IDD5 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC78A2IDD5 AL590824.1-201ENST00000403828 1349 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms