Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR7E115P-201ENST00000382617 1024 ntBASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 GNG10P1-201ENST00000452289 199 ntBASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 LINC00634-202ENST00000505157 222 ntBASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 MIR5196-201ENST00000578146 115 ntBASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AC019109.1-201ENST00000401725 1874 ntBASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTDP1Q9Y5B0 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 RNVU1-8-201ENST00000364272 125 ntBASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AL357563.1-201ENST00000404728 395 ntBASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 OR52M2P-201ENST00000414298 959 ntBASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AC087386.2-201ENST00000623212 4637 ntBASIC16.21■□□□□ 0.19
CTDP1Q9Y5B0 AL390755.1-201ENST00000623716 2027 ntBASIC16.21■□□□□ 0.18
CTDP1Q9Y5B0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTDP1Q9Y5B0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.21■□□□□ 0.18
CTDP1Q9Y5B0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.21■□□□□ 0.18
CTDP1Q9Y5B0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTDP1Q9Y5B0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms