Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
USB1Q9BQ65 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
USB1Q9BQ65 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC104073.2-201ENST00000453737 312 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC026407.1-201ENST00000518369 204 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 MTND1P36-201ENST00000522384 936 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AL161670.2-201ENST00000557650 1227 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC004918.3-201ENST00000602609 925 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 AL645939.5-201ENST00000606834 243 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 CU633904.3-201ENST00000624042 1029 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 Z98259.2-201ENST00000641583 609 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC136759.1-202ENST00000530858 2194 ntBASIC12.84□□□□□ -0.35
USB1Q9BQ65 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.84□□□□□ -0.35
USB1Q9BQ65 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
USB1Q9BQ65 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
USB1Q9BQ65 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.35
USB1Q9BQ65 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.83□□□□□ -0.35
USB1Q9BQ65 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
USB1Q9BQ65 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
USB1Q9BQ65 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.83□□□□□ -0.35
USB1Q9BQ65 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.83□□□□□ -0.35
USB1Q9BQ65 AL157791.1-201ENST00000553667 1699 ntBASIC12.83□□□□□ -0.35
USB1Q9BQ65 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
USB1Q9BQ65 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.83□□□□□ -0.36
USB1Q9BQ65 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC12.83□□□□□ -0.36
USB1Q9BQ65 MTND2P12-201ENST00000417560 1252 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms