Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC000077.1-201ENST00000420012 953 ntBASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AHCYP3-201ENST00000420053 1279 ntBASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 CICP16-201ENST00000502609 2813 ntBASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC090643.2-201ENST00000623442 2029 ntBASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CRAMP1Q96RY5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 AC020763.3-201ENST00000625095 2904 ntBASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 AC233724.9-201ENST00000511694 407 ntBASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRAMP1Q96RY5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 AC008038.1-201ENST00000634247 1314 ntBASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 MIR611-201ENST00000384869 67 ntBASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 RPSAP6-201ENST00000417882 882 ntBASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 AC092910.2-201ENST00000491262 348 ntBASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.77■□□□□ 0.28
CRAMP1Q96RY5 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms