Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 AC138701.2-201ENST00000553634 226 ntBASIC15.78■□□□□ 0.12
TNFRSF25Q93038 AL132994.1-201ENST00000554098 400 ntBASIC15.78■□□□□ 0.12
TNFRSF25Q93038 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 AC012073.1-201ENST00000606114 1108 ntBASIC15.78■□□□□ 0.12
TNFRSF25Q93038 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.78■□□□□ 0.12
TNFRSF25Q93038 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TNFRSF25Q93038 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 PI4KAP2-201ENST00000360806 2080 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AL512430.1-201ENST00000392575 860 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC025186.1-201ENST00000478174 870 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC130709.1-201ENST00000484779 1212 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 PRSS3P1-201ENST00000503996 742 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 SNORD3B-1-201ENST00000577988 758 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC025262.2-201ENST00000623975 1056 ntBASIC15.77■□□□□ 0.12
TNFRSF25Q93038 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TNFRSF25Q93038 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 AC063926.3-201ENST00000624734 5658 ntBASIC15.77■□□□□ 0.11
TNFRSF25Q93038 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF25Q93038 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 AC012531.1-201ENST00000562848 2680 ntBASIC15.76■□□□□ 0.11
TNFRSF25Q93038 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 RNVU1-8-201ENST00000364272 125 ntBASIC15.76■□□□□ 0.11
TNFRSF25Q93038 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF25Q93038 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms