Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.25□□□□□ -0.45
CCDC107Q8WV48 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCDC107Q8WV48 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ABCD1P2-201ENST00000429313 1601 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AL354989.2-201ENST00000435838 1540 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 RNA5SP486-201ENST00000515961 83 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 MIR4683-201ENST00000579659 81 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AC025048.6-201ENST00000634326 1161 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC107Q8WV48 AL031719.1-201ENST00000623365 2587 ntBASIC12.24□□□□□ -0.45
CCDC107Q8WV48 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 AC008620.2-201ENST00000510294 1569 ntBASIC12.23□□□□□ -0.45
CCDC107Q8WV48 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC107Q8WV48 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms