Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ALG1L13P-202ENST00000519320 584 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AP001258.2-201ENST00000529891 490 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 RN7SL455P-201ENST00000580629 282 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AL645939.5-201ENST00000606834 243 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AC020658.7-201ENST00000624274 2442 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC067931.2-201ENST00000623655 2003 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 BX679664.3-201ENST00000414070 555 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC113935.1-201ENST00000471722 555 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC091804.1-201ENST00000486888 567 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC090857.1-201ENST00000527400 390 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC243960.2-201ENST00000600996 747 ntBASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NUP43Q8NFH3 AC093462.1-201ENST00000621167 1683 ntBASIC13.15□□□□□ -0.31
NUP43Q8NFH3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 AC015909.3-201ENST00000572855 1794 ntBASIC13.15□□□□□ -0.31
NUP43Q8NFH3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NUP43Q8NFH3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms