Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AC006122.1-201ENST00000493323 440 ntBASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AC100827.2-201ENST00000563214 1194 ntBASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AC009542.2-202ENST00000619004 1067 ntBASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 VENTXP1-201ENST00000569334 2716 ntBASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CLDN22Q8N7P3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.83□□□□□ -0.35
CLDN22Q8N7P3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 KRT18P36-201ENST00000411618 1276 ntBASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC079178.1-201ENST00000420915 656 ntBASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC022210.1-201ENST00000449856 793 ntBASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC005730.2-201ENST00000564549 1184 ntBASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC244157.2-201ENST00000616239 1006 ntBASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN22Q8N7P3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms