Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AL008707.1-201ENST00000422498 534 ntBASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC108725.1-201ENST00000495472 409 ntBASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 AC138649.2-201ENST00000615886 705 ntBASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 NAP1L6-202ENST00000641404 1222 ntBASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 NCLP1-201ENST00000445357 1963 ntBASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TTC9CQ8N5M4 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
TTC9CQ8N5M4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 AL391647.1-201ENST00000395664 511 ntBASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.14□□□□□ -0.63
TTC9CQ8N5M4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms