Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC092384.3-202ENST00000564646 2873 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC17.68■□□□□ 0.42
PROM2Q8N271 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 MIR181D-201ENST00000384853 137 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PROM2Q8N271 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 MIR1226-201ENST00000408658 75 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 CD37-203ENST00000426897 1204 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 ALDOAP1-201ENST00000491506 1078 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 AL450346.2-201ENST00000495602 1024 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC17.68■□□□□ 0.42
PROM2Q8N271 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PROM2Q8N271 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC106785.2-201ENST00000564385 1319 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 AC068760.1-201ENST00000493579 1953 ntBASIC17.68■□□□□ 0.42
PROM2Q8N271 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.68■□□□□ 0.42
PROM2Q8N271 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PROM2Q8N271 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PROM2Q8N271 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 U3.41-201ENST00000408711 219 ntBASIC17.67■□□□□ 0.42
PROM2Q8N271 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC17.67■□□□□ 0.42
PROM2Q8N271 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 MTND6P32-201ENST00000457611 483 ntBASIC17.67■□□□□ 0.42
PROM2Q8N271 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AC104640.1-201ENST00000562617 2109 ntBASIC17.67■□□□□ 0.42
PROM2Q8N271 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC17.67■□□□□ 0.42
PROM2Q8N271 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PROM2Q8N271 Z93930.3-201ENST00000607919 749 ntBASIC17.67■□□□□ 0.42
PROM2Q8N271 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC17.67■□□□□ 0.42
PROM2Q8N271 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.67■□□□□ 0.42
PROM2Q8N271 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PROM2Q8N271 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
PROM2Q8N271 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC17.66■□□□□ 0.42
PROM2Q8N271 MTND2P12-201ENST00000417560 1252 ntBASIC17.66■□□□□ 0.42
PROM2Q8N271 OR51A6P-201ENST00000418680 1004 ntBASIC17.66■□□□□ 0.42
PROM2Q8N271 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC17.66■□□□□ 0.42
PROM2Q8N271 HLA-W-207ENST00000439514 771 ntBASIC17.66■□□□□ 0.42
PROM2Q8N271 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PROM2Q8N271 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC17.66■□□□□ 0.42
PROM2Q8N271 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms