Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.21□□□□□ -0.3
CDCP2Q5VXM1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 FGD5P1-202ENST00000614866 2498 ntBASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 KRT8P30-201ENST00000432100 650 ntBASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 VDAC1P11-201ENST00000458323 852 ntBASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 FTLP5-201ENST00000586853 534 ntBASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDCP2Q5VXM1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 TUBB8P4-201ENST00000511806 1324 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 LINC00552-201ENST00000625151 2579 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC041040.1-201ENST00000425197 460 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC136604.1-202ENST00000425471 771 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC113347.2-201ENST00000512350 279 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC091304.3-201ENST00000566500 716 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 KRT8P34-201ENST00000577607 1044 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PRMT1P1-201ENST00000604252 1009 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 AC048382.6-201ENST00000621980 1223 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 Z98885.3-201ENST00000624882 1757 ntBASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDCP2Q5VXM1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.18□□□□□ -0.3
CDCP2Q5VXM1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms