Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LINC02228-204ENST00000642115 2962 ntBASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 RPSAP16-201ENST00000447583 821 ntBASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 TUBB8P5-201ENST00000445286 1351 ntBASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 AC072061.1-201ENST00000569710 2234 ntBASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.42■□□□□ 0.7
SPHKAPQ2M3C7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPHKAPQ2M3C7 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 FAM90A12P-201ENST00000519497 2375 ntBASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 FAM90A24P-201ENST00000520792 2369 ntBASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 HNRNPLP1-201ENST00000421896 1501 ntBASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPHKAPQ2M3C7 POM121L4P-202ENST00000427789 1891 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms