Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.38□□□□□ -0.27
SKP1P63208 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.38□□□□□ -0.27
SKP1P63208 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SKP1P63208 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SKP1P63208 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SKP1P63208 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.37□□□□□ -0.27
SKP1P63208 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 COQ10BP2-201ENST00000513804 724 ntBASIC13.37□□□□□ -0.27
SKP1P63208 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 AC145285.5-201ENST00000562217 361 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.37□□□□□ -0.27
SKP1P63208 MIR3677-201ENST00000578964 60 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AC097724.1-201ENST00000609581 426 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AC079336.7-201ENST00000623428 1078 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AC015967.2-201ENST00000624092 234 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AC006435.4-201ENST00000625037 234 ntBASIC13.37□□□□□ -0.27
SKP1P63208 AL356737.1-201ENST00000634391 234 ntBASIC13.37□□□□□ -0.27
SKP1P63208 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.37□□□□□ -0.27
SKP1P63208 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 AL591122.2-201ENST00000624125 1853 ntBASIC13.37□□□□□ -0.27
SKP1P63208 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.37□□□□□ -0.27
SKP1P63208 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 MST1P2-201ENST00000457982 2291 ntBASIC13.37□□□□□ -0.27
SKP1P63208 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SKP1P63208 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.37□□□□□ -0.27
SKP1P63208 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.36□□□□□ -0.27
SKP1P63208 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.36□□□□□ -0.27
SKP1P63208 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 AL731571.1-201ENST00000617058 5428 ntBASIC13.36□□□□□ -0.27
SKP1P63208 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.36□□□□□ -0.27
SKP1P63208 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.36□□□□□ -0.27
SKP1P63208 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 RPL18AP8-201ENST00000486071 528 ntBASIC13.36□□□□□ -0.27
SKP1P63208 AC138701.2-201ENST00000553634 226 ntBASIC13.36□□□□□ -0.27
SKP1P63208 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.36□□□□□ -0.27
SKP1P63208 AC132825.4-202ENST00000578792 434 ntBASIC13.36□□□□□ -0.27
SKP1P63208 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.36□□□□□ -0.27
SKP1P63208 AL021578.1-201ENST00000613646 709 ntBASIC13.36□□□□□ -0.27
SKP1P63208 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.36□□□□□ -0.27
SKP1P63208 CICP16-201ENST00000502609 2813 ntBASIC13.36□□□□□ -0.27
SKP1P63208 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SKP1P63208 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms