Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.09□□□□□ -0.15
AP1S1P61966 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
AP1S1P61966 SNORD3B-1-201ENST00000577988 758 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AL049840.2-201ENST00000602722 535 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AL606495.2-201ENST00000605867 535 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AL031673.1-201ENST00000611460 466 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 AF013593.1-201ENST00000458074 1487 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AC025183.3-201ENST00000623526 1482 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 AC041040.2-201ENST00000622926 2899 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 MARK2P9-201ENST00000430958 1727 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 PES1P2-201ENST00000449745 1735 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 NRADDP-202ENST00000641269 1585 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP1S1P61966 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
AP1S1P61966 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP1S1P61966 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.08□□□□□ -0.15
AP1S1P61966 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.08□□□□□ -0.15
AP1S1P61966 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
AP1S1P61966 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
AP1S1P61966 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AP1S1P61966 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 MIR1307-201ENST00000408840 149 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 RPL3P2-204ENST00000413027 1203 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 HERC2P11-201ENST00000562845 725 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC100756.2-201ENST00000569537 736 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC016629.1-201ENST00000596579 586 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 AL359091.4-201ENST00000610052 409 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC084781.1-201ENST00000613737 656 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
AP1S1P61966 AC242376.2-201ENST00000619355 883 ntBASIC14.08□□□□□ -0.16
AP1S1P61966 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.08□□□□□ -0.16
AP1S1P61966 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AP1S1P61966 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP1S1P61966 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.07□□□□□ -0.16
AP1S1P61966 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
AP1S1P61966 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP1S1P61966 AC091046.1-201ENST00000331871 207 ntBASIC14.07□□□□□ -0.16
AP1S1P61966 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms