Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
PER3P56645 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
PER3P56645 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
PER3P56645 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PER3P56645 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.14□□□□□ -0.31
PER3P56645 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.14□□□□□ -0.31
PER3P56645 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 AL583805.1-201ENST00000391389 531 ntBASIC13.14□□□□□ -0.31
PER3P56645 AL512430.1-201ENST00000392575 860 ntBASIC13.14□□□□□ -0.31
PER3P56645 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 RPL13AP19-201ENST00000434320 584 ntBASIC13.14□□□□□ -0.31
PER3P56645 ALG3P1-201ENST00000508806 1114 ntBASIC13.14□□□□□ -0.31
PER3P56645 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.14□□□□□ -0.31
PER3P56645 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.14□□□□□ -0.31
PER3P56645 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.14□□□□□ -0.31
PER3P56645 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 NUDT4P2-201ENST00000578341 546 ntBASIC13.14□□□□□ -0.31
PER3P56645 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 AL136172.1-201ENST00000598590 1394 ntBASIC13.14□□□□□ -0.31
PER3P56645 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.14□□□□□ -0.31
PER3P56645 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
PER3P56645 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PER3P56645 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PER3P56645 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PER3P56645 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 BEND3P3-201ENST00000611030 2440 ntBASIC13.13□□□□□ -0.31
PER3P56645 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
PER3P56645 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 AC131902.2-201ENST00000566892 2172 ntBASIC13.13□□□□□ -0.31
PER3P56645 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
PER3P56645 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
PER3P56645 AL627389.1-201ENST00000413508 1182 ntBASIC13.13□□□□□ -0.31
PER3P56645 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
PER3P56645 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 AC012362.1-201ENST00000434906 739 ntBASIC13.13□□□□□ -0.31
PER3P56645 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 GCOM2-201ENST00000509133 1104 ntBASIC13.13□□□□□ -0.31
PER3P56645 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.13□□□□□ -0.31
PER3P56645 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.13□□□□□ -0.31
PER3P56645 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.13□□□□□ -0.31
PER3P56645 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 BX088702.1-201ENST00000610784 235 ntBASIC13.13□□□□□ -0.31
PER3P56645 MIR6756-201ENST00000616240 63 ntBASIC13.13□□□□□ -0.31
PER3P56645 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.13□□□□□ -0.31
PER3P56645 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.13□□□□□ -0.31
PER3P56645 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PER3P56645 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms