Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 AF013593.1-201ENST00000458074 1487 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CPT1AP50416 NHP2P1-201ENST00000335274 462 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 RNA5SP491-201ENST00000362936 118 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.36■□□□□ 0.05
CPT1AP50416 AC103563.1-201ENST00000429316 123 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.36■□□□□ 0.05
CPT1AP50416 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
CPT1AP50416 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.36■□□□□ 0.05
CPT1AP50416 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.36■□□□□ 0.05
CPT1AP50416 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.36■□□□□ 0.05
CPT1AP50416 MIR3940-201ENST00000579148 102 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 GGNBP1-204ENST00000613113 887 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.36■□□□□ 0.05
CPT1AP50416 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.36■□□□□ 0.05
CPT1AP50416 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.36■□□□□ 0.05
CPT1AP50416 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
CPT1AP50416 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CPT1AP50416 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.36■□□□□ 0.05
CPT1AP50416 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.36■□□□□ 0.05
CPT1AP50416 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPT1AP50416 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CPT1AP50416 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CPT1AP50416 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.35■□□□□ 0.05
CPT1AP50416 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.35■□□□□ 0.05
CPT1AP50416 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CPT1AP50416 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CPT1AP50416 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CPT1AP50416 HLA-DMA-202ENST00000395303 1007 ntBASIC15.35■□□□□ 0.05
CPT1AP50416 RPSAP12-201ENST00000435879 888 ntBASIC15.35■□□□□ 0.05
CPT1AP50416 AC025594.1-201ENST00000469533 543 ntBASIC15.35■□□□□ 0.05
CPT1AP50416 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.35■□□□□ 0.05
CPT1AP50416 AC004801.1-201ENST00000549557 360 ntBASIC15.35■□□□□ 0.05
CPT1AP50416 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.35■□□□□ 0.05
CPT1AP50416 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.35■□□□□ 0.05
CPT1AP50416 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.35■□□□□ 0.05
CPT1AP50416 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 TNRC18P2-201ENST00000417666 2714 ntBASIC15.35■□□□□ 0.05
CPT1AP50416 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPT1AP50416 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
CPT1AP50416 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CPT1AP50416 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 TCAM1P-207ENST00000485295 1537 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms