Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC1A1P43005 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.71□□□□□ -0.06
SLC1A1P43005 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SLC1A1P43005 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.71□□□□□ -0.06
SLC1A1P43005 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
SLC1A1P43005 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC004554.1-201ENST00000422830 1468 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SLC1A1P43005 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 RPS9P1-201ENST00000419943 583 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC005740.2-201ENST00000511085 419 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 AC116345.2-201ENST00000512837 523 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC013355.1-201ENST00000562625 723 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC005695.3-201ENST00000614522 232 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SLC1A1P43005 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC002350.2-201ENST00000623894 1828 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC1A1P43005 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC1A1P43005 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC1A1P43005 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC1A1P43005 AC005562.1-201ENST00000583030 3219 ntBASIC14.7□□□□□ -0.06
SLC1A1P43005 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 AF013593.1-201ENST00000458074 1487 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 POM121L14P-201ENST00000406100 1558 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 AC125807.2-201ENST00000513358 3514 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC1A1P43005 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 MIR658-201ENST00000385210 100 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 SERPINA13P-202ENST00000478994 924 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 AC005740.1-201ENST00000515639 522 ntBASIC14.69□□□□□ -0.06
SLC1A1P43005 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC1A1P43005 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SLC1A1P43005 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC1A1P43005 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC1A1P43005 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC1A1P43005 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms