Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
VARSP26640 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 HMGB1P8-201ENST00000558211 949 ntBASIC13.96□□□□□ -0.17
VARSP26640 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC13.96□□□□□ -0.17
VARSP26640 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.96□□□□□ -0.17
VARSP26640 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
VARSP26640 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VARSP26640 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.96□□□□□ -0.17
VARSP26640 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.96□□□□□ -0.17
VARSP26640 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
VARSP26640 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
VARSP26640 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.96□□□□□ -0.18
VARSP26640 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VARSP26640 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.96□□□□□ -0.18
VARSP26640 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VARSP26640 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 KRT8P19-201ENST00000551916 1455 ntBASIC13.95□□□□□ -0.18
VARSP26640 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VARSP26640 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.95□□□□□ -0.18
VARSP26640 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 FAM58BP-201ENST00000439056 645 ntBASIC13.95□□□□□ -0.18
VARSP26640 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.95□□□□□ -0.18
VARSP26640 ST13P19-201ENST00000442505 1124 ntBASIC13.95□□□□□ -0.18
VARSP26640 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.95□□□□□ -0.18
VARSP26640 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.95□□□□□ -0.18
VARSP26640 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.95□□□□□ -0.18
VARSP26640 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 AC007663.3-201ENST00000609632 465 ntBASIC13.95□□□□□ -0.18
VARSP26640 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.95□□□□□ -0.18
VARSP26640 AC027348.2-201ENST00000624375 642 ntBASIC13.95□□□□□ -0.18
VARSP26640 AC100757.4-201ENST00000626934 759 ntBASIC13.95□□□□□ -0.18
VARSP26640 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.95□□□□□ -0.18
VARSP26640 AC072061.1-201ENST00000569710 2234 ntBASIC13.95□□□□□ -0.18
VARSP26640 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VARSP26640 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VARSP26640 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VARSP26640 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VARSP26640 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.94□□□□□ -0.18
VARSP26640 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms