Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 AC125604.1-201ENST00000496255 707 ntBASIC12.06□□□□□ -0.48
CCL1P22362 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
CCL1P22362 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.06□□□□□ -0.48
CCL1P22362 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.06□□□□□ -0.48
CCL1P22362 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 TUBB1P2-201ENST00000422712 1306 ntBASIC12.06□□□□□ -0.48
CCL1P22362 TUBB1P1-201ENST00000503144 1300 ntBASIC12.06□□□□□ -0.48
CCL1P22362 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AC060814.4-201ENST00000594169 2163 ntBASIC12.05□□□□□ -0.48
CCL1P22362 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.05□□□□□ -0.48
CCL1P22362 DUX4L50-201ENST00000455245 715 ntBASIC12.05□□□□□ -0.48
CCL1P22362 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.05□□□□□ -0.48
CCL1P22362 AL583810.1-201ENST00000553344 1045 ntBASIC12.05□□□□□ -0.48
CCL1P22362 NDUFB10P1-201ENST00000567319 521 ntBASIC12.05□□□□□ -0.48
CCL1P22362 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.05□□□□□ -0.48
CCL1P22362 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.05□□□□□ -0.48
CCL1P22362 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CCL1P22362 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 AGGF1P10-201ENST00000635005 2191 ntBASIC12.05□□□□□ -0.48
CCL1P22362 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCL1P22362 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CCL1P22362 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CCL1P22362 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CCL1P22362 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.04□□□□□ -0.48
CCL1P22362 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms