Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.29□□□□□ -0.12
NFKB1P19838 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NFKB1P19838 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 SNORA50C-201ENST00000408535 133 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
NFKB1P19838 GPAA1P2-201ENST00000417923 928 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.29□□□□□ -0.12
NFKB1P19838 SLC25A15P3-201ENST00000505530 290 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.29□□□□□ -0.12
NFKB1P19838 RN7SL774P-201ENST00000577467 290 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 NDUFV2P1-201ENST00000596415 907 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 SNORA50.1-201ENST00000628590 135 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NFKB1P19838 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 KRT8P43-201ENST00000406052 1458 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 AC138028.6-201ENST00000616106 1482 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 AC005562.1-201ENST00000583030 3219 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NFKB1P19838 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NFKB1P19838 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
NFKB1P19838 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NFKB1P19838 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
NFKB1P19838 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
NFKB1P19838 LINC00638-201ENST00000555578 2518 ntBASIC14.29□□□□□ -0.12
NFKB1P19838 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 AL008707.1-201ENST00000422498 534 ntBASIC14.28□□□□□ -0.12
NFKB1P19838 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC073150.1-201ENST00000450406 1084 ntBASIC14.28□□□□□ -0.12
NFKB1P19838 AKR7A2P1-201ENST00000460134 915 ntBASIC14.28□□□□□ -0.12
NFKB1P19838 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.28□□□□□ -0.12
NFKB1P19838 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC14.28□□□□□ -0.12
NFKB1P19838 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.28□□□□□ -0.12
NFKB1P19838 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.28□□□□□ -0.12
NFKB1P19838 AC004623.1-201ENST00000624592 2127 ntBASIC14.28□□□□□ -0.12
NFKB1P19838 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.28□□□□□ -0.12
NFKB1P19838 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.28□□□□□ -0.12
NFKB1P19838 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NFKB1P19838 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms