Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 MIR1247-201ENST00000408206 136 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 FNTAP2-201ENST00000430308 634 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC116345.2-201ENST00000512837 523 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC005740.1-201ENST00000515639 522 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 FMO6P-201ENST00000236166 1620 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 FRMPD2B-201ENST00000431305 1347 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SALL4P6-201ENST00000429385 1691 ntBASIC12.61□□□□□ -0.39
HLA-DOBP13765 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DOBP13765 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DOBP13765 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 GPAA1P2-201ENST00000417923 928 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AL596276.2-201ENST00000447525 331 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 AC099548.2-209ENST00000480264 625 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 HIST2H2BC-201ENST00000498492 580 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AC090857.1-201ENST00000527400 390 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 KRT8P1-201ENST00000557533 1207 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 RN7SL774P-201ENST00000577467 290 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms