Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL4P13236 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 AC104961.1-201ENST00000427605 771 ntBASIC13.12□□□□□ -0.31
CCL4P13236 NRADDP-201ENST00000437305 691 ntBASIC13.12□□□□□ -0.31
CCL4P13236 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.12□□□□□ -0.31
CCL4P13236 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL4P13236 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.12□□□□□ -0.31
CCL4P13236 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL4P13236 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 URAHP-205ENST00000610227 398 ntBASIC13.12□□□□□ -0.31
CCL4P13236 CSTP2-201ENST00000610599 398 ntBASIC13.12□□□□□ -0.31
CCL4P13236 AC018695.6-201ENST00000614011 534 ntBASIC13.12□□□□□ -0.31
CCL4P13236 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.12□□□□□ -0.31
CCL4P13236 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 AL139424.3-202ENST00000641619 917 ntBASIC13.12□□□□□ -0.31
CCL4P13236 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL4P13236 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL4P13236 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL4P13236 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCL4P13236 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL4P13236 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL4P13236 RPL3P5-201ENST00000441645 1232 ntBASIC13.11□□□□□ -0.31
CCL4P13236 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL4P13236 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL4P13236 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 KNOP1P1-201ENST00000542108 989 ntBASIC13.11□□□□□ -0.31
CCL4P13236 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 BAP1-211ENST00000615113 489 ntBASIC13.11□□□□□ -0.31
CCL4P13236 OR2I1P-210ENST00000642037 4691 ntBASIC13.11□□□□□ -0.31
CCL4P13236 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.11□□□□□ -0.31
CCL4P13236 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL4P13236 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL4P13236 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL4P13236 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms