Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CD48P09326 AC006987.1-201ENST00000413610 527 ntBASIC14.54□□□□□ -0.08
CD48P09326 BX679664.3-201ENST00000414070 555 ntBASIC14.54□□□□□ -0.08
CD48P09326 CYP46A4P-201ENST00000414953 267 ntBASIC14.54□□□□□ -0.08
CD48P09326 ISCA2P1-201ENST00000425548 448 ntBASIC14.54□□□□□ -0.08
CD48P09326 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 AC113935.1-201ENST00000471722 555 ntBASIC14.54□□□□□ -0.08
CD48P09326 HIST2H2BC-201ENST00000498492 580 ntBASIC14.54□□□□□ -0.08
CD48P09326 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.54□□□□□ -0.08
CD48P09326 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.54□□□□□ -0.08
CD48P09326 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD48P09326 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CD48P09326 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.53□□□□□ -0.08
CD48P09326 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 Z98885.3-201ENST00000624882 1757 ntBASIC14.53□□□□□ -0.08
CD48P09326 MARK2P16-201ENST00000605714 1723 ntBASIC14.53□□□□□ -0.08
CD48P09326 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CD48P09326 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CD48P09326 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.53□□□□□ -0.08
CD48P09326 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 FNTAP2-201ENST00000430308 634 ntBASIC14.53□□□□□ -0.08
CD48P09326 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.53□□□□□ -0.08
CD48P09326 AC007274.1-201ENST00000439805 662 ntBASIC14.53□□□□□ -0.08
CD48P09326 SPTLC1P5-201ENST00000450718 252 ntBASIC14.53□□□□□ -0.08
CD48P09326 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.53□□□□□ -0.08
CD48P09326 SLC25A15P3-201ENST00000505530 290 ntBASIC14.53□□□□□ -0.08
CD48P09326 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 AC090857.1-201ENST00000527400 390 ntBASIC14.53□□□□□ -0.08
CD48P09326 RN7SL774P-201ENST00000577467 290 ntBASIC14.53□□□□□ -0.08
CD48P09326 AC020914.3-201ENST00000594712 304 ntBASIC14.53□□□□□ -0.08
CD48P09326 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.53□□□□□ -0.08
CD48P09326 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.53□□□□□ -0.08
CD48P09326 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.53□□□□□ -0.08
CD48P09326 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.53□□□□□ -0.08
CD48P09326 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.53□□□□□ -0.08
CD48P09326 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD48P09326 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.52□□□□□ -0.08
CD48P09326 AL591122.2-201ENST00000624125 1853 ntBASIC14.52□□□□□ -0.08
CD48P09326 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 AL355102.3-201ENST00000554299 1678 ntBASIC14.52□□□□□ -0.08
CD48P09326 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.52□□□□□ -0.08
CD48P09326 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CD48P09326 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms